You can mount all env variables from secret in the following way:
containers:
- name: app
envFrom:
- secretRef:
name: db-secret
As for where Spring gets secrets from - I'm not an expert in Spring but it seems there is already an explanation in the link you provided:
When enabled, the Fabric8SecretsPropertySource looks up Kubernetes for
Secrets from the following sources:
Reading recursively from secrets mounts
Named after the application (as defined by spring.application.name)
Matching some labels
So it takes secrets from secrets mount (if you mount them as volumes). It also scans Kubernetes API for secrets (i guess in the same namespaces the app is running in). It can do it by utilizing Kubernetes serviceaccount token which by default is always mounted into the pod. It is up to what Kubernetes RBAC permissions are given to pod's serviceaccount.
So it tries to search secrets using Kubernetes API and match them against application name or application labels.
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