r - Coalesce two string columns with alternating missing values to one

Question

I have a data frame with two columns "a" and "b" with alternating missing values (NA)

a      b
dog    <NA>
mouse  <NA>
<NA>   cat
bird   <NA>

I want to "merge" / combine them to a new column c that looks like this, i.e. the non-NA element in each row is selected:

c
dog
mouse
cat
bird

I tried merge and join, but neither worked as I wanted. Maybe because I do not have an id with which to merge? For integers I would just circumvent this and add both columns, but how in my case?

Answer 1

You may try pmax

df$c <- pmax(df$a, df$b)
df
#       a    b     c
# 1   dog <NA>   dog
# 2 mouse <NA> mouse
# 3  <NA>  cat   cat
# 4  bird <NA>  bird

...or ifelse:

df$c <- ifelse(is.na(df$a), df$b, df$a)

For more general solutions in cases with more than two columns, you find several ways to implement coalesce in R here.