python - How to change data points color based on some variable

Question

I have 2 variables (x,y) that change with time (t). I want to plot x vs. t and color the ticks based on the value of y. e.g. for highest values of y the tick color is dark green, for lowest value is dark red, and for intermediate values the color will be scaled in between green and red.

Can this be done with matplotlib in python?

Answer 1

This is what matplotlib.pyplot.scatter is for.

If no colormap is specified, scatter will use whatever the default colormap is set to. To specify which colormap scatter should use, use the cmap kwarg (e.g. cmap="jet").

As a quick example:

import matplotlib.pyplot as plt
import matplotlib.colors as mcolors
import numpy as np

# Generate data...
t = np.linspace(0, 2 * np.pi, 20)
x = np.sin(t)
y = np.cos(t)

plt.scatter(t, x, c=y, ec='k')
plt.show()

One may specify a custom color map and norm

cmap, norm = mcolors.from_levels_and_colors([0, 2, 5, 6], ['red', 'green', 'blue'])
plt.scatter(x, y, c=t, cmap=cmap, norm=norm)