This might be a related bug report, it's been around for quite a while: http://bugs.jqueryui.com/ticket/3740
It seems to happen on every browser I tested (Chrome, FF4, IE9). There are a few ways you can work around this issue:
1. Use position:absolute;
in your css. Absolutely positioned elements don't seem to be affected.
2. Make sure the parent element (event if it's the body) has overflow:auto;
set. My test showed that this solution fixes the position, but it disables the autoscroll functionality. You can still scroll using the mousewheel or the arrow keys.
3. Apply the fix suggested in the above bug report manually and test thouroughly if it causes other problems.
4. Wait for an official fix. It's scheduled to jQuery UI 1.9, although it has been postponed a few times in the past.
5. If you're confident that it happens on every browser, you can put these hacks into the affected draggables' events to correct the calculations. It's a lot of different browsers to test though, so it should only be used as a last resort:
$('.drag').draggable({
scroll:true,
start: function(){
$(this).data("startingScrollTop",$(this).parent().scrollTop());
},
drag: function(event,ui){
var st = parseInt($(this).data("startingScrollTop"));
ui.position.top -= $(this).parent().scrollTop() - st;
}
});
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