Given the sample data:
data <- read.table(header=TRUE, row.names=1, sep=" ", text="x col1 col2 col3
ABC111001 12 12 13
ABC111002 3 4 5
ABC000111 7 6 1
ABC000112 9 23 1")
... you can select matching rows using grep
:
> data[grep('^ABC111', rownames(data)),]
col1 col2 col3
ABC111001 12 12 13
ABC111002 3 4 5
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