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.htaccess - Using htaccess to remove codeigniter index.php in a subdirectory

I'm trying to remove the index.php from my CI urls, but having followed the instructions it doesn't seem to be working.

I have a codeigniter installation running in a subdirectory. There is a default controller set in the routes config called main, and another controller called 'create'. The default runs fine, but going to /create returns a 324 error saying No Data Received. My htaccess looks like this:

<IfModule mod_rewrite.c>

RewriteEngine On
RewriteBase /

RewriteCond %{REQUEST_URI} ^system.*
RewriteRule ^(.*)$ /index.php?/$1 [L]

RewriteCond %{REQUEST_FILENAME} !-f
RewriteCond %{REQUEST_FILENAME} !-d
RewriteRule ^(.*)$ index.php?/$1 [L]

</IfModule>

<IfModule !mod_rewrite.c>
    ErrorDocument 404 /index.php
</IfModule>
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by (71.8m points)

This should be enough:

<IfModule mod_rewrite.c>
RewriteEngine On

#Checks to see if the user is attempting to access a valid file,
#such as an image or css document, if this isn't true it sends the
#request to index.php
RewriteCond %{REQUEST_FILENAME} !-f
RewriteCond %{REQUEST_FILENAME} !-d
#This last condition enables access to the images and css folders, and the robots.txt file
RewriteCond $1 !^(index.php|public|images|robots.txt|css)
RewriteRule ^(.*)$ index.php/$1 [L]
</IfModule>

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