I asked this question on GitHub, and I thought I would post it here as well. My apologies if this is posted in the wrong location. If that is the case, any guidance as to where I can ask this question would be greatly appreciated. I am new to coding and StackOverflow, but have found many answers to posts on this forum very helpful. I am trying to setup a code to utilize the Keras model for deep learning with a 3d dataset, and am uncertain how to deal with the error I'm receiving (in the title). I have found a similar error reported on this forum, but the response was that it would be fixed in TensorFlow v 2.1. I am using v2.4.0, so I expect I'm probably doing something wrong here. The code I am using is as follows:
# define the keras model
model = Sequential()
model.add(Dense(12, input_dim=7, activation='relu'))
model.add(Dense(8, activation='relu'))
model.add(Dense(1, activation='sigmoid'))
# compile the keras model
model.compile(loss='binary_crossentropy', optimizer='adam', metrics=['accuracy'])
# separate the data
X_train, X_test, y_train, y_test = train_test_split(X, Y, test_size=0.3, random_state=0)
# fit the keras model on the dataset
model.fit(X_train, y_train, epochs=150, batch_size=10)
# evaluate the keras model
_, accuracy = model.evaluate(X_test, y_test)
print('Accuracy: %.2f' % (accuracy*100))
Information on the variables as follows:
X is an array of float64, with size (152,7,169), Y is an array of
int32, with size (152,)
Information on versions as follows:
Python version 3.8.5,
Keras version 2.4.3,
TensorFlow version 2.4.0,
Windows 10,
Intel(R) Core(TM) i5-8350U CPU @ 1.70GHz 1.90 GHz (AVX capable),
Spyder version 4.2.0
The full error I am getting is as follows:
Epoch 1/150 Traceback (most recent call last):
File "C:UserspdeolDocumentsCodingPracticeKerasCombined.py", line
171, in model.fit(X_train, y_train, epochs=150, batch_size=10)
File
"C:Userspdeolanaconda3libsite-packagesensorflowpythonkerasengineraining.py",
line 1100, in fit tmp_logs = self.train_function(iterator)
File
"C:Userspdeolanaconda3libsite-packagesensorflowpythoneagerdef_function.py",
line 828, in call result = self._call(*args, **kwds)
File
"C:Userspdeolanaconda3libsite-packagesensorflowpythoneagerdef_function.py",
line 871, in _call self._initialize(args, kwds,
add_initializers_to=initializers)
File
"C:Userspdeolanaconda3libsite-packagesensorflowpythoneagerdef_function.py",
line 725, in _initialize
self._stateful_fn._get_concrete_function_internal_garbage_collected( #
pylint: disable=protected-access
File
"C:Userspdeolanaconda3libsite-packagesensorflowpythoneagerfunction.py",
line 2969, in _get_concrete_function_internal_garbage_collected
graph_function, _ = self._maybe_define_function(args, kwargs)
File
"C:Userspdeolanaconda3libsite-packagesensorflowpythoneagerfunction.py",
line 3361, in _maybe_define_function graph_function =
self._create_graph_function(args, kwargs)
File
"C:Userspdeolanaconda3libsite-packagesensorflowpythoneagerfunction.py",
line 3196, in _create_graph_function
func_graph_module.func_graph_from_py_func(
File
"C:Userspdeolanaconda3libsite-packagesensorflowpythonframeworkfunc_graph.py",
line 990, in func_graph_from_py_func func_outputs =
python_func(*func_args, **func_kwargs)
File
"C:Userspdeolanaconda3libsite-packagesensorflowpythoneagerdef_function.py",
line 634, in wrapped_fn out = weak_wrapped_fn().wrapped(*args, **kwds)
File
"C:Userspdeolanaconda3libsite-packagesensorflowpythonframeworkfunc_graph.py",
line 977, in wrapper raise e.ag_error_metadata.to_exception(e)
ValueError: in user code:
C:Userspdeolanaconda3libsite-packagesensorflowpythonkerasengineraining.py:805
train_function *
return step_function(self, iterator) C:Userspdeolanaconda3libsite-packagesensorflowpythonkerasengineraining.py:795
step_function **
outputs = model.distribute_strategy.run(run_step, args=(data,)) C:Userspdeolanaconda3libsite-packagesensorflowpythondistributedistribute_lib.py:1259
run
return self._extended.call_for_each_replica(fn, args=args, kwargs=kwargs)
C:Userspdeolanaconda3libsite-packagesensorflowpythondistributedistribute_lib.py:2730
call_for_each_replica
return self._call_for_each_replica(fn, args, kwargs) C:Userspdeolanaconda3libsite-packagesensorflowpythondistributedistribute_lib.py:3417
_call_for_each_replica
return fn(*args, **kwargs) C:Userspdeolanaconda3libsite-packagesensorflowpythonkerasengineraining.py:788
run_step **
outputs = model.train_step(data) C:Userspdeolanaconda3libsite-packagesensorflowpythonkerasengineraining.py:754
train_step
y_pred = self(x, training=True) C:Userspdeolanaconda3libsite-packagesensorflowpythonkerasenginease_layer.py:998
call
input_spec.assert_input_compatibility(self.input_spec, inputs, self.name)
C:Userspdeolanaconda3libsite-packagesensorflowpythonkerasengineinput_spec.py:255
assert_input_compatibility
raise ValueError(
ValueError: Input 0 of layer sequential is incompatible with the
layer: expected axis -1 of input shape to have value 7 but received
input with shape (None, 7, 169)
The above error is what I receive every time I run this code. I just restarted the software and ran it again, and in addition to the above error, I received the following error immediately below:
2020-12-30 10:17:26.556667: W
tensorflow/stream_executor/platform/default/dso_loader.cc:60] Could
not load dynamic library 'cudart64_110.dll'; dlerror: cudart64_110.dll
not found 2020-12-30 10:17:26.557141: I
tensorflow/stream_executor/cuda/cudart_stub.cc:29] Ignore above cudart
dlerror if you do not have a GPU set up on your machine. 2020-12-30
10:26:08.613023: I tensorflow/compiler/jit/xla_cpu_device.cc:41] Not
creating XLA devices, tf_xla_enable_xla_devices not set 2020-12-30
10:26:08.616994: W
tensorflow/stream_executor/platform/default/dso_loader.cc:60] Could
not load dynamic library 'nvcuda.dll'; dlerror: nvcuda.dll not found
2020-12-30 10:26:08.617895: W
tensorflow/stream_executor/cuda/cuda_driver.cc:326] failed call to
cuInit: UNKNOWN ERROR (303) 2020-12-30 10:26:08.628902: I
tensorflow/stream_executor/cuda/cuda_diagnostics.cc:169] retrieving
CUDA diagnostic information for host: LT-B831B58344E3 2020-12-30
10:26:08.629094: I
tensorflow/stream_executor/cuda/cuda_diagnostics.cc:176] hostname:
LT-B831B58344E3 2020-12-30 10:26:08.634489: I
tensorflow/core/platform/cpu_feature_guard.cc:142] This TensorFlow
binary is optimized with oneAPI Deep Neural Network Library (oneDNN)
to use the following CPU instructions in performance-critical
operations: AVX2 To enable them in other operations, rebuild
TensorFlow with the appropriate compiler flags. 2020-12-30
10:26:08.636834: I tensorflow/compiler/jit/xla_gpu_device.cc:99] Not
creating XLA devices, tf_xla_enable_xla_devices not set 2020-12-30
10:26:08.863911: I
tensorflow/compiler/mlir/mlir_graph_optimization_pass.cc:116] None of
the MLIR optimization passes are enabled (registered 2)
I'm not sure if this is related, or a completely separate issue. Any information or guidance you can provide would be greatly appreciated.
